Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm17837-201ENSMUST00000186435 985 ntBASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm38294-201ENSMUST00000192831 381 ntBASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdh1F7BJK1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm13453-201ENSMUST00000118708 357 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm38144-201ENSMUST00000192790 465 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm17795-201ENSMUST00000214505 757 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Gm6888-201ENSMUST00000221983 706 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh1F7BJK1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Gm44872-201ENSMUST00000207864 420 ntBASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms