Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.29□□□□□ -0.28
Ccdc149F6V035 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc149F6V035 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm4986-201ENSMUST00000119731 549 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm13297-201ENSMUST00000120205 934 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm7584-201ENSMUST00000175829 940 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Mir7221-201ENSMUST00000184009 72 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm38158-201ENSMUST00000194617 339 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm43758-201ENSMUST00000199500 367 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm8227-201ENSMUST00000223306 571 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.28□□□□□ -0.28
Ccdc149F6V035 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc149F6V035 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc149F6V035 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 Gm6334-201ENSMUST00000207083 228 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 Gm45865-201ENSMUST00000211815 945 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.27□□□□□ -0.29
Ccdc149F6V035 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc149F6V035 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms