Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Gm8385-201ENSMUST00000058999 643 ntBASIC11.74□□□□□ -0.53
Shank1D3YZU1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shank1D3YZU1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm11331-201ENSMUST00000119764 288 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm25043-201ENSMUST00000158604 212 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm5950-201ENSMUST00000213337 772 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.73□□□□□ -0.53
Shank1D3YZU1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shank1D3YZU1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm24514-201ENSMUST00000174961 285 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 AU022133-201ENSMUST00000200601 873 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.72□□□□□ -0.53
Shank1D3YZU1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shank1D3YZU1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms