Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.47□□□□□ -0.09
Scn3aA2ASI5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3aA2ASI5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm12997-201ENSMUST00000120207 640 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm13813-201ENSMUST00000120998 787 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm15547-201ENSMUST00000122152 333 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm15276-201ENSMUST00000145953 498 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.46□□□□□ -0.09
Scn3aA2ASI5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scn3aA2ASI5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.45□□□□□ -0.1
Scn3aA2ASI5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.45□□□□□ -0.1
Scn3aA2ASI5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scn3aA2ASI5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.44□□□□□ -0.1
Scn3aA2ASI5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms