Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tubb1A2AQ07 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tubb1A2AQ07 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gm15823-201ENSMUST00000064305 670 ntBASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tubb1A2AQ07 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Tubb1A2AQ07 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms