Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm45453-201ENSMUST00000211758 853 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm18027-201ENSMUST00000218947 619 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Daam2-202ENSMUST00000224595 1926 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm12260-201ENSMUST00000122447 411 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms