Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.75□□□□□ -0.69
Trav18A0A075B656 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav18A0A075B656 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.74□□□□□ -0.69
Trav18A0A075B656 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Mir7684-201ENSMUST00000183858 60 ntBASIC10.74□□□□□ -0.69
Trav18A0A075B656 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav18A0A075B656 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm14719-201ENSMUST00000121891 340 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm24694-201ENSMUST00000180054 110 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Mir8102-201ENSMUST00000184148 139 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm27663-201ENSMUST00000184839 110 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.73□□□□□ -0.69
Trav18A0A075B656 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms