Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm5356-201ENSMUST00000093326 615 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldn13Q9Z0S4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm12403-201ENSMUST00000121384 959 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm6244-201ENSMUST00000178732 841 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm27892-201ENSMUST00000185017 106 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm29608-201ENSMUST00000190444 463 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm44397-201ENSMUST00000195950 113 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldn13Q9Z0S4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldn13Q9Z0S4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms