Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gm13342-201ENSMUST00000121055 207 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcb1Q9Z0H3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm13297-201ENSMUST00000120205 934 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm27516-201ENSMUST00000184237 98 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm37489-201ENSMUST00000191883 159 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarcb1Q9Z0H3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcb1Q9Z0H3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms