Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm15240-201ENSMUST00000118156 720 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm25948-201ENSMUST00000175334 112 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm44335-201ENSMUST00000196879 141 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm44297-201ENSMUST00000198304 141 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm44346-201ENSMUST00000198851 141 ntBASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.1□□□□□ -0.63
Cx3cr1Q9Z0D9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm6415-201ENSMUST00000118488 348 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm27533-201ENSMUST00000183800 152 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cx3cr1Q9Z0D9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms