Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim3Q9R1R2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim3Q9R1R2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm11478-201ENSMUST00000117851 599 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim3Q9R1R2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim3Q9R1R2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trim3Q9R1R2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim3Q9R1R2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trim3Q9R1R2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms