Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm29608-201ENSMUST00000190444 463 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm45384-201ENSMUST00000210451 277 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm45925-201ENSMUST00000218882 744 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Gm26315-201ENSMUST00000083890 321 ntBASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf40aQ9R1C7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40aQ9R1C7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40aQ9R1C7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40aQ9R1C7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf40aQ9R1C7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Gm12490-201ENSMUST00000120255 560 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf40aQ9R1C7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Gm2495-201ENSMUST00000191160 466 ntBASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf40aQ9R1C7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf40aQ9R1C7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms