Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm21769-201ENSMUST00000211922 111 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm6082-201ENSMUST00000215204 454 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Limd1Q9QXD8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Gm22121-201ENSMUST00000175148 54 ntBASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Limd1Q9QXD8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm14363-201ENSMUST00000122304 409 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm20482-202ENSMUST00000174729 825 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm22119-201ENSMUST00000175594 99 ntBASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.43□□□□□ -0.1
Limd1Q9QXD8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms