Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm43125-201ENSMUST00000201724 730 ntBASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm18206-201ENSMUST00000207027 926 ntBASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm10175-201ENSMUST00000086013 645 ntBASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Hcfc2Q9D968 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Gm15653-201ENSMUST00000119247 907 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Gm24420-201ENSMUST00000176676 59 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hcfc2Q9D968 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms