Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Gm44397-201ENSMUST00000195950 113 ntBASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Gm6983-201ENSMUST00000214912 628 ntBASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Gm18624-201ENSMUST00000220966 658 ntBASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gtf3c6Q9D8P7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Gtf3c6Q9D8P7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gtf3c6Q9D8P7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gm37917-201ENSMUST00000194711 392 ntBASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gtf3c6Q9D8P7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm12859-201ENSMUST00000117834 427 ntBASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm5687-201ENSMUST00000118252 640 ntBASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm6447-201ENSMUST00000118905 835 ntBASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.13□□□□□ -0.15
Gtf3c6Q9D8P7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms