Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sh2d4aQ9D7V1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Gm27321-201ENSMUST00000185021 205 ntBASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Gm44344-201ENSMUST00000200287 129 ntBASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Gm8396-201ENSMUST00000057361 823 ntBASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sh2d4aQ9D7V1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.74□□□□□ -0.37
Sh2d4aQ9D7V1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Mir874-201ENSMUST00000104769 76 ntBASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.73□□□□□ -0.37
Sh2d4aQ9D7V1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms