Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm18624-201ENSMUST00000220966 658 ntBASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc7Q9D541 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm15429-201ENSMUST00000151268 798 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc7Q9D541 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Gm18473-201ENSMUST00000220543 868 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc7Q9D541 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc7Q9D541 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms