Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm28911-201ENSMUST00000188837 117 ntBASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retreg3Q9CQV4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm14739-201ENSMUST00000120424 802 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm20177-201ENSMUST00000203705 334 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm8463-201ENSMUST00000208573 613 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm38325-201ENSMUST00000194507 1377 ntBASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retreg3Q9CQV4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retreg3Q9CQV4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms