Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Prpf8Q99PV0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Prpf8Q99PV0 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.77□□□□□ -0.69
Prpf8Q99PV0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prpf8Q99PV0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.77□□□□□ -0.69
Prpf8Q99PV0 Gm4986-201ENSMUST00000119731 549 ntBASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm27341-201ENSMUST00000183570 106 ntBASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm22121-201ENSMUST00000175148 54 ntBASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Cog3-203ENSMUST00000227473 4197 ntBASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Prpf8Q99PV0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm28693-202ENSMUST00000190758 331 ntBASIC10.75□□□□□ -0.69
Prpf8Q99PV0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm11978-201ENSMUST00000122315 466 ntBASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Prpf8Q99PV0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms