Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim11Q99PQ2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Mir6392-201ENSMUST00000184924 108 ntBASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Gm2423-201ENSMUST00000074863 733 ntBASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim11Q99PQ2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gm15429-201ENSMUST00000151268 798 ntBASIC14.94□□□□□ -0.02
Trim11Q99PQ2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Itm2b-204ENSMUST00000228637 783 ntBASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim11Q99PQ2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim11Q99PQ2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms