Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Paupar-201ENSMUST00000194826 3482 ntBASIC12.85□□□□□ -0.35
Trim16Q99PP9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim16Q99PP9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.84□□□□□ -0.35
Trim16Q99PP9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.84□□□□□ -0.35
Trim16Q99PP9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim16Q99PP9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.84□□□□□ -0.35
Trim16Q99PP9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.84□□□□□ -0.35
Trim16Q99PP9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.84□□□□□ -0.35
Trim16Q99PP9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim16Q99PP9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trim16Q99PP9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.83□□□□□ -0.36
Trim16Q99PP9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.83□□□□□ -0.36
Trim16Q99PP9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.83□□□□□ -0.36
Trim16Q99PP9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim16Q99PP9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms