Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col25a1Q99MQ5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Col25a1Q99MQ5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm2231-201ENSMUST00000125661 612 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm25072-201ENSMUST00000175233 235 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm23153-201ENSMUST00000175323 313 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm45856-201ENSMUST00000212752 416 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col25a1Q99MQ5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm11801-201ENSMUST00000117807 746 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Mir3060-201ENSMUST00000175339 83 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm8768-201ENSMUST00000220020 826 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col25a1Q99MQ5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col25a1Q99MQ5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms