Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf111Q99ML9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf111Q99ML9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Matn2-203ENSMUST00000226766 3252 ntBASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gm12485-201ENSMUST00000119641 291 ntBASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gm5745-201ENSMUST00000183748 313 ntBASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rnf111Q99ML9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf111Q99ML9 Gm5866-201ENSMUST00000177881 973 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms