Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm11531-201ENSMUST00000117614 555 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm27023-201ENSMUST00000182372 285 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx6-1Q99MA9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm14208-201ENSMUST00000119645 678 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm11331-201ENSMUST00000119764 288 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 AA914427-201ENSMUST00000193194 1166 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm43378-201ENSMUST00000199336 582 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx6-1Q99MA9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms