Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3b5Q923D4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm11637-201ENSMUST00000120601 592 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm13123-201ENSMUST00000122173 492 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm8602-201ENSMUST00000184045 607 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm6091-201ENSMUST00000098307 165 ntBASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3b5Q923D4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sf3b5Q923D4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Sf3b5Q923D4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Sf3b5Q923D4 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.58□□□□□ -0.55
Sf3b5Q923D4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sf3b5Q923D4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm4271-201ENSMUST00000174444 973 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm27331-201ENSMUST00000183705 60 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm29705-201ENSMUST00000212598 474 ntBASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3b5Q923D4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms