Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdha3Q91Y16 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdha3Q91Y16 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gm27839-201ENSMUST00000184242 106 ntBASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdha3Q91Y16 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Gm15824-201ENSMUST00000119516 955 ntBASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdha3Q91Y16 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms