Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb1Q91Y08 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pcdhb1Q91Y08 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gm13612-201ENSMUST00000119276 390 ntBASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gm45384-201ENSMUST00000210451 277 ntBASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gm9908-201ENSMUST00000211534 448 ntBASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb1Q91Y08 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm11918-201ENSMUST00000121660 179 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm6745-201ENSMUST00000199216 526 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm38671-201ENSMUST00000200573 130 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm7287-201ENSMUST00000205267 602 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb1Q91Y08 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb1Q91Y08 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms