Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm5866-201ENSMUST00000177881 973 ntBASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhga3Q91XY5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Gm15376-201ENSMUST00000122258 783 ntBASIC11.71□□□□□ -0.53
Pcdhga3Q91XY5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms