Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm17150-201ENSMUST00000165577 381 ntBASIC13.02□□□□□ -0.33
Usb1Q91W78 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm6244-201ENSMUST00000178732 841 ntBASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm2495-201ENSMUST00000191160 466 ntBASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.02□□□□□ -0.33
Usb1Q91W78 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.02□□□□□ -0.33
Usb1Q91W78 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Usb1Q91W78 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.02□□□□□ -0.33
Usb1Q91W78 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usb1Q91W78 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.02□□□□□ -0.33
Usb1Q91W78 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm29608-201ENSMUST00000190444 463 ntBASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm44397-201ENSMUST00000195950 113 ntBASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm8463-201ENSMUST00000208573 613 ntBASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.01□□□□□ -0.33
Usb1Q91W78 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.01□□□□□ -0.33
Usb1Q91W78 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Usb1Q91W78 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usb1Q91W78 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Usb1Q91W78 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Gm9816-201ENSMUST00000122292 1414 ntBASIC13□□□□□ -0.33
Usb1Q91W78 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Gm12928-201ENSMUST00000117115 573 ntBASIC13□□□□□ -0.33
Usb1Q91W78 Gm13829-201ENSMUST00000119600 138 ntBASIC13□□□□□ -0.33
Usb1Q91W78 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Usb1Q91W78 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13□□□□□ -0.33
Usb1Q91W78 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Usb1Q91W78 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usb1Q91W78 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms