Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm13316-201ENSMUST00000140537 691 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm24548-201ENSMUST00000158650 108 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 AU022133-201ENSMUST00000200601 873 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm18212-201ENSMUST00000211678 889 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm30285-201ENSMUST00000214614 422 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.97□□□□□ -0.33
Vsx1Q91V10 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vsx1Q91V10 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm44069-201ENSMUST00000204898 506 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm44967-201ENSMUST00000207047 631 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm8959-201ENSMUST00000213150 571 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm19208-201ENSMUST00000213861 912 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm5781-201ENSMUST00000219792 443 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm19163-201ENSMUST00000223313 780 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.96□□□□□ -0.33
Vsx1Q91V10 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vsx1Q91V10 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.96□□□□□ -0.34
Vsx1Q91V10 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.96□□□□□ -0.34
Vsx1Q91V10 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vsx1Q91V10 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Vsx1Q91V10 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms