Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm26315-201ENSMUST00000083890 321 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm45706-201ENSMUST00000213063 2136 ntBASIC11□□□□□ -0.65
H1fooQ8VIK3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm15371-201ENSMUST00000117057 784 ntBASIC11□□□□□ -0.65
H1fooQ8VIK3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Gm10576-201ENSMUST00000191927 825 ntBASIC11□□□□□ -0.65
H1fooQ8VIK3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 AC156560.2-201ENSMUST00000221232 264 ntBASIC11□□□□□ -0.65
H1fooQ8VIK3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11□□□□□ -0.65
H1fooQ8VIK3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11□□□□□ -0.65
H1fooQ8VIK3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H1fooQ8VIK3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.99□□□□□ -0.65
H1fooQ8VIK3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm13689-201ENSMUST00000119360 685 ntBASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H1fooQ8VIK3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms