Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TraipQ8VIG6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.98□□□□□ -0.17
TraipQ8VIG6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.98□□□□□ -0.17
TraipQ8VIG6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm23757-201ENSMUST00000158353 100 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm44364-201ENSMUST00000198368 141 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.97□□□□□ -0.17
TraipQ8VIG6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TraipQ8VIG6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.96□□□□□ -0.17
TraipQ8VIG6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm14921-201ENSMUST00000118643 908 ntBASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm12291-201ENSMUST00000121627 311 ntBASIC13.96□□□□□ -0.17
TraipQ8VIG6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm43758-201ENSMUST00000199500 367 ntBASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gm45865-201ENSMUST00000211815 945 ntBASIC13.96□□□□□ -0.17
TraipQ8VIG6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TraipQ8VIG6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TraipQ8VIG6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm10434-201ENSMUST00000101158 471 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm22323-201ENSMUST00000103832 109 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm11222-201ENSMUST00000119005 738 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm4986-201ENSMUST00000119731 549 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm8502-201ENSMUST00000185708 901 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm21147-201ENSMUST00000186046 913 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Gm8510-201ENSMUST00000189202 895 ntBASIC13.95□□□□□ -0.18
TraipQ8VIG6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms