Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.78□□□□□ -0.36
Q8VDP2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.78□□□□□ -0.36
Q8VDP2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Gm14140-201ENSMUST00000119999 995 ntBASIC12.78□□□□□ -0.36
Q8VDP2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.78□□□□□ -0.36
Q8VDP2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Q8VDP2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.78□□□□□ -0.36
Q8VDP2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Gm5264-201ENSMUST00000190584 848 ntBASIC12.78□□□□□ -0.36
Q8VDP2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.78□□□□□ -0.36
Q8VDP2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.78□□□□□ -0.36
Q8VDP2 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.78□□□□□ -0.36
Q8VDP2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Q8VDP2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Q8VDP2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.78□□□□□ -0.36
Q8VDP2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q8VDP2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Q8VDP2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q8VDP2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Q8VDP2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q8VDP2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q8VDP2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q8VDP2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Q8VDP2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Q8VDP2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.77□□□□□ -0.37
Q8VDP2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Gm13036-201ENSMUST00000117799 748 ntBASIC12.77□□□□□ -0.37
Q8VDP2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Gm12260-201ENSMUST00000122447 411 ntBASIC12.77□□□□□ -0.37
Q8VDP2 Gm18622-201ENSMUST00000219361 595 ntBASIC12.77□□□□□ -0.37
Q8VDP2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Q8VDP2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Q8VDP2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.77□□□□□ -0.37
Q8VDP2 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.77□□□□□ -0.37
Q8VDP2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Q8VDP2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.77□□□□□ -0.37
Q8VDP2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q8VDP2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.77□□□□□ -0.37
Q8VDP2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.76□□□□□ -0.37
Q8VDP2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.76□□□□□ -0.37
Q8VDP2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.76□□□□□ -0.37
Q8VDP2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.76□□□□□ -0.37
Q8VDP2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.76□□□□□ -0.37
Q8VDP2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Q8VDP2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q8VDP2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms