Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm8805-201ENSMUST00000117848 313 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm13123-201ENSMUST00000122173 492 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm37497-201ENSMUST00000195830 798 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.39□□□□□ -0.11
Rpap2Q8VC34 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gm27847-201ENSMUST00000183711 107 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gm27375-201ENSMUST00000183799 107 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gm7561-201ENSMUST00000211203 886 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpap2Q8VC34 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gm12203-201ENSMUST00000118235 598 ntBASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gm12209-201ENSMUST00000120089 596 ntBASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gm22331-201ENSMUST00000158066 136 ntBASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpap2Q8VC34 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms