Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps39Q8R5L3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gm16215-201ENSMUST00000161990 637 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps39Q8R5L3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps39Q8R5L3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vps39Q8R5L3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.15□□□□□ -0.31
Vps39Q8R5L3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.14□□□□□ -0.31
Vps39Q8R5L3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps39Q8R5L3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps39Q8R5L3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps39Q8R5L3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms