Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Nup35Q8R4R6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nup35Q8R4R6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.7□□□□□ -0.7
Nup35Q8R4R6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gm5264-201ENSMUST00000190584 848 ntBASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup35Q8R4R6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Gm3436-201ENSMUST00000179930 840 ntBASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup35Q8R4R6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup35Q8R4R6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms