Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd109Q8R422 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm7857-201ENSMUST00000117957 358 ntBASIC18.41■□□□□ 0.54
Cd109Q8R422 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cd109Q8R422 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm45224-201ENSMUST00000208203 414 ntBASIC18.41■□□□□ 0.54
Cd109Q8R422 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm43823-201ENSMUST00000197391 1808 ntBASIC18.41■□□□□ 0.54
Cd109Q8R422 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cd109Q8R422 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd109Q8R422 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm14832-201ENSMUST00000121289 322 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm18753-201ENSMUST00000201000 566 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm18212-201ENSMUST00000211678 889 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm2673-201ENSMUST00000120958 1608 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd109Q8R422 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC18.4■□□□□ 0.54
Cd109Q8R422 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm8856-201ENSMUST00000185254 1144 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC18.4■□□□□ 0.54
Cd109Q8R422 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd109Q8R422 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC18.39■□□□□ 0.54
Cd109Q8R422 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.39■□□□□ 0.54
Cd109Q8R422 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Gm25732-201ENSMUST00000175168 60 ntBASIC18.39■□□□□ 0.53
Cd109Q8R422 Gm44262-201ENSMUST00000204969 372 ntBASIC18.39■□□□□ 0.53
Cd109Q8R422 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms