Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Gm5867-201ENSMUST00000063197 592 ntBASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afjQ8R1M2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
H2afjQ8R1M2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gm15240-201ENSMUST00000118156 720 ntBASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gm20445-201ENSMUST00000061905 565 ntBASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afjQ8R1M2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Gm9522-201ENSMUST00000182394 926 ntBASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afjQ8R1M2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms