Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.48■□□□□ 0.07
Atf7Q8R0S1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.48■□□□□ 0.07
Atf7Q8R0S1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atf7Q8R0S1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Proscos-202ENSMUST00000178990 666 ntBASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atf7Q8R0S1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.46■□□□□ 0.07
Atf7Q8R0S1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Atf7Q8R0S1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atf7Q8R0S1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atf7Q8R0S1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Atf7Q8R0S1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atf7Q8R0S1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Mir686-201ENSMUST00000102174 109 ntBASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Gm12138-201ENSMUST00000122180 951 ntBASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.45■□□□□ 0.06
Atf7Q8R0S1 Gm6458-201ENSMUST00000211573 635 ntBASIC15.45■□□□□ 0.06
Atf7Q8R0S1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atf7Q8R0S1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms