Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Gm11340-201ENSMUST00000119226 412 ntBASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Rn7s6-201ENSMUST00000175005 291 ntBASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Ddx54Q8K4L0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm14460-201ENSMUST00000121511 639 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm23363-201ENSMUST00000175024 79 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm38210-201ENSMUST00000191944 809 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 AC132901.1-201ENSMUST00000224345 508 ntBASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx54Q8K4L0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm23949-201ENSMUST00000104027 127 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm12795-201ENSMUST00000117594 539 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm24845-201ENSMUST00000158034 109 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm17391-201ENSMUST00000171036 126 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Gm27627-201ENSMUST00000183644 150 ntBASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms