Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cchcr1Q8K2I2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gm12341-201ENSMUST00000119724 503 ntBASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gm6983-201ENSMUST00000214912 628 ntBASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Gm6218-201ENSMUST00000219812 628 ntBASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cchcr1Q8K2I2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.52■□□□□ 0.07
Cchcr1Q8K2I2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cchcr1Q8K2I2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.5■□□□□ 0.07
Cchcr1Q8K2I2 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms