Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm13689-201ENSMUST00000119360 685 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgcs1Q8JZK9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.52□□□□□ -0.4
Hmgcs1Q8JZK9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgcs1Q8JZK9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgcs1Q8JZK9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgcs1Q8JZK9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgcs1Q8JZK9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmgcs1Q8JZK9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.51□□□□□ -0.41
Hmgcs1Q8JZK9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms