Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.42□□□□□ -0.26
CopaQ8CIE6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Gm9899-201ENSMUST00000065519 555 ntBASIC13.42□□□□□ -0.26
CopaQ8CIE6 Gm5161-201ENSMUST00000075243 853 ntBASIC13.42□□□□□ -0.26
CopaQ8CIE6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CopaQ8CIE6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.41□□□□□ -0.26
CopaQ8CIE6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm43630-201ENSMUST00000201550 776 ntBASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.41□□□□□ -0.26
CopaQ8CIE6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.41□□□□□ -0.26
CopaQ8CIE6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CopaQ8CIE6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm13612-201ENSMUST00000119276 390 ntBASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CopaQ8CIE6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms