Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ShfQ8CG80 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ShfQ8CG80 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ShfQ8CG80 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ShfQ8CG80 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
ShfQ8CG80 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ShfQ8CG80 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm22189-201ENSMUST00000103822 86 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm14719-201ENSMUST00000121891 340 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Mir8102-201ENSMUST00000184148 139 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ShfQ8CG80 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.7□□□□□ -0.54
ShfQ8CG80 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ShfQ8CG80 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm11978-201ENSMUST00000122315 466 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.69□□□□□ -0.54
ShfQ8CG80 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ShfQ8CG80 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.69□□□□□ -0.54
ShfQ8CG80 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ShfQ8CG80 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ShfQ8CG80 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ShfQ8CG80 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms