Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Mir8109-201ENSMUST00000184375 117 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm38092-201ENSMUST00000195600 653 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm3786-201ENSMUST00000202659 378 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm3961-201ENSMUST00000204425 994 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm9823-201ENSMUST00000051212 327 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm24526-201ENSMUST00000082921 158 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm7584-201ENSMUST00000175829 940 ntBASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm3890-201ENSMUST00000182416 207 ntBASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Gm38158-201ENSMUST00000194617 339 ntBASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.16■□□□□ 0.02
Shisa4Q8CA71 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.16■□□□□ 0.02
Shisa4Q8CA71 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gm13350-201ENSMUST00000120519 479 ntBASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gm43822-201ENSMUST00000200285 476 ntBASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shisa4Q8CA71 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms