Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm37008-201ENSMUST00000195712 319 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm45880-201ENSMUST00000213041 853 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Snora73a-201ENSMUST00000082453 205 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk5rap1Q8BTW8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm16379-201ENSMUST00000161469 348 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm38002-201ENSMUST00000193255 180 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm8762-201ENSMUST00000193486 339 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdk5rap1Q8BTW8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdk5rap1Q8BTW8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms