Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.08■□□□□ 0
VmacQ8BP01 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.08■□□□□ 0
VmacQ8BP01 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
VmacQ8BP01 Gm17150-201ENSMUST00000165577 381 ntBASIC15.08■□□□□ 0
VmacQ8BP01 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.08■□□□□ 0
VmacQ8BP01 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.08■□□□□ 0
VmacQ8BP01 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.08■□□□□ 0
VmacQ8BP01 Gm10146-201ENSMUST00000072739 309 ntBASIC15.08■□□□□ 0
VmacQ8BP01 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
VmacQ8BP01 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.08■□□□□ 0
VmacQ8BP01 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.08■□□□□ 0
VmacQ8BP01 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.08■□□□□ 0
VmacQ8BP01 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
VmacQ8BP01 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VmacQ8BP01 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.07■□□□□ 0
VmacQ8BP01 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.07■□□□□ 0
VmacQ8BP01 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Gm37042-201ENSMUST00000193816 581 ntBASIC15.07■□□□□ 0
VmacQ8BP01 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.07■□□□□ 0
VmacQ8BP01 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.07■□□□□ 0
VmacQ8BP01 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.07■□□□□ 0
VmacQ8BP01 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.07■□□□□ 0
VmacQ8BP01 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VmacQ8BP01 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.07■□□□□ 0
VmacQ8BP01 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VmacQ8BP01 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.07■□□□□ 0
VmacQ8BP01 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.07■□□□□ 0
VmacQ8BP01 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VmacQ8BP01 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.06■□□□□ 0
VmacQ8BP01 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.06■□□□□ 0
VmacQ8BP01 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
VmacQ8BP01 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Gm26927-201ENSMUST00000182385 965 ntBASIC15.06■□□□□ 0
VmacQ8BP01 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.06■□□□□ 0
VmacQ8BP01 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.06■□□□□ 0
VmacQ8BP01 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
VmacQ8BP01 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VmacQ8BP01 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.05■□□□□ 0
VmacQ8BP01 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.05■□□□□ 0
VmacQ8BP01 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms