Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Gm32999-201ENSMUST00000192693 562 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Gm10774-201ENSMUST00000188689 204 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Mir7686-201ENSMUST00000200604 57 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Ginm1-202ENSMUST00000065124 300 ntBASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smg1Q8BKX6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm43752-201ENSMUST00000198475 697 ntBASIC10.8□□□□□ -0.68
Smg1Q8BKX6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm9132-201ENSMUST00000210182 832 ntBASIC10.8□□□□□ -0.68
Smg1Q8BKX6 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Smg1Q8BKX6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Gm13937-201ENSMUST00000121000 988 ntBASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Mir6998-201ENSMUST00000183343 64 ntBASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Smg1Q8BKX6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.79□□□□□ -0.68
Smg1Q8BKX6 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.79□□□□□ -0.68
Smg1Q8BKX6 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.79□□□□□ -0.68
Smg1Q8BKX6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms