Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Mir874-201ENSMUST00000104769 76 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Gm21854-201ENSMUST00000179901 471 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf38Q8BI21 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.69□□□□□ -0.38
Rnf38Q8BI21 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm12485-201ENSMUST00000119641 291 ntBASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf38Q8BI21 Gm14719-201ENSMUST00000121891 340 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms