Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm14704-201ENSMUST00000120300 874 ntBASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm44262-201ENSMUST00000204969 372 ntBASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Snrnp40Q6PE01 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm27023-201ENSMUST00000182372 285 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm28450-201ENSMUST00000187349 638 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm8885-201ENSMUST00000189382 598 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm8385-201ENSMUST00000058999 643 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm22058-201ENSMUST00000083393 310 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Daam2-202ENSMUST00000224595 1926 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Snrnp40Q6PE01 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm13461-201ENSMUST00000120980 662 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm25732-201ENSMUST00000175168 60 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm25700-201ENSMUST00000177693 110 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm5523-201ENSMUST00000180415 997 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm43378-201ENSMUST00000199336 582 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm8099-201ENSMUST00000200510 742 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm8959-201ENSMUST00000213150 571 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms